Package: psme 1.0.0

Zheyuan Li

psme: Penalized Splines Mixed-Effects Models

Fit penalized splines mixed-effects models (a special case of additive models) for large longitudinal datasets. The package includes a psme() function that (1) relies on package 'mgcv' for constructing population and subject smooth functions as penalized splines, (2) transforms the constructed additive model to a linear mixed-effects model, (3) exploits package 'lme4' for model estimation and (4) backtransforms the estimated linear mixed-effects model to the additive model for interpretation and visualizaiton. See Pedersen et al. (2019) <doi:10.7717/peerj.6876> and Bates et al. (2015) <doi:10.18637/jss.v067.i01> for an introduction. Unlike the gamm() function in 'mgcv', the psme() function is fast and memory-efficient, able to handle datasets with millions of observations.

Authors:Zheyuan Li [aut, cre]

psme_1.0.0.tar.gz
psme_1.0.0.zip(r-4.7-any)psme_1.0.0.zip(r-4.6-any)psme_1.0.0.zip(r-4.5-any)
psme_1.0.0.tgz(r-4.6-any)psme_1.0.0.tgz(r-4.5-any)
psme_1.0.0.tar.gz(r-4.7-any)psme_1.0.0.tar.gz(r-4.6-any)
psme_1.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
psme/json (API)

# Install 'psme' in R:
install.packages('psme', repos = c('https://zheyuanli.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/zheyuanli/psme/issues

On CRAN:

Conda:

2.70 score 1 stars 217 downloads 3 exports 14 dependencies

Last updated from:583b42a23c. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK111
source / vignettesOK168
linux-releaseOK161
macos-releaseOK148
macos-oldrelOK183
windows-develOK82
windows-releaseOK75
windows-oldrelOK80
wasm-releaseOK79

Exports:EvalSmoothGetExtremapsme

Dependencies:bootlatticelme4MASSMatrixmgcvminqanlmenloptrrbibutilsRcppRcppEigenRdpackreformulas